Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015836502.1_cds_XP_016506346.1_19579
CDS Infomation

[gene=LOC107824123] [db_xref=GeneID:107824123] [protein=transmembrane protein 53-A-like] [protein_id=XP_016506346.1] [location=join(40614..41338,41445..41550,42105..42310,42566..42836)] [gbkey=CDS]
Sequence

ATGGCTTCGTTTTCTGGAATCCTCCAAAGACCGATAGTTGCAGCATCTGCAGTCGCTATA
ACTTCTGTATCTACTGATCTTCATGAAAAATTTTGGCCCTCAAAATCAATAGAGAATTCT
TCTTCTGAAGCATTGCAAGAAAAGAAAACATCATGGGTGTCTCAGATATCCGTATCTAAG
CTTGCCAATTTGTCCTTTGTCCCCAGAATACGCGTTCCTGTGCCTAACATAAGTGTTCCA
AGTCCCAGCATCAGTTCTGGTTTTGTTTCAAATCTTTCGTGTTCTGCCATAGGCATTTCT
TCCGTGTTGGTCAATTTTTATCAATCAGCATCATTGGCTAAGTCGGCAAATCCATCAACA
TATACTTATACAGTTCCTTCTTCGCCTTCAGAGGTGTTGTATAGATGGCATTTACCAGAG
CCAAATGTCGTTGATATATCAGGGAATTATGATTGTTCATCAGTAAAGTCTAGGACTGTG
GTAGTACTGTTGGGATGGTTAGGTGCAAAACAGAAGCATCTAAAGAGATATGCAGAGTGG
TATGCCTCAGCAGGATATCATGTCATTACATTTACTTTCCCAATGTCTGAGATTCTTAGC
TATCAAGTCGGGGGAAAGGCAGAGCAGGATATAGAACTGCTTGTGAACCATCTTGCTGAT
TGGTTGGAAGAAGAGCATGGAAAGAACTTGGTCTTCCACACTTTCAGTAACACGGGATGG
TTAACTTATGGTGTCATTTTGGAGAAGTTTCAGAAACAAGATCCTGTTTTAATGACAAGG
ATCAAAGGTTGTATTGTTGATTCTGCTCCTGTAGCTGCTCCCGATCCACAGGTATGGGCT
TCTGGATTCTCTGCTGCCTTTTTGAAGAAGAATAGTGTTGCAACCAAACACATCATGACT
ATAAACAACAAAGATGCAGATGTGACAATAGAAACCAAAACTTCTTCGGATGCTACACCT
GCAGTAACTGAAGCAGCTTTGCTAGTAGTACTGGAGAAGTTCTTTGAGGTGGTTTTGAGC
CTTCCCGCCGTAAATAGGAGACTTTCTGATGTTCTAGATCTATTGACATCCCAGCAACCA
AGTTGCCCACAATTGTACATATACAGCAGTGCAGACAGAGTGATTCCTGCGATTTCTGTT
GAGTCCTTTGTAGAGGAGCAACGAAGAATTGGTCGCAACGTTAGAGCTTGCAACTTCATT
TCTACACCTCATGTTGATCATTTCAGAAATGACCCAGAATTATATACTTTACAGCTTACC
CAATTTCTTGAGGACTCCGTTCTAAGCTCTTGCAAACAGTCTTCCTGA

Peptide Sequence

PEP ID

XP_016506346.1
PEP Infomation

PREDICTED: transmembrane protein 53-A-like [Nicotiana tabacum]
Sequence

MASFSGILQRPIVAASAVAITSVSTDLHEKFWPSKSIENSSSEALQEKKTSWVSQISVSK
LANLSFVPRIRVPVPNISVPSPSISSGFVSNLSCSAIGISSVLVNFYQSASLAKSANPST
YTYTVPSSPSEVLYRWHLPEPNVVDISGNYDCSSVKSRTVVVLLGWLGAKQKHLKRYAEW
YASAGYHVITFTFPMSEILSYQVGGKAEQDIELLVNHLADWLEEEHGKNLVFHTFSNTGW
LTYGVILEKFQKQDPVLMTRIKGCIVDSAPVAAPDPQVWASGFSAAFLKKNSVATKHIMT
INNKDADVTIETKTSSDATPAVTEAALLVVLEKFFEVVLSLPAVNRRLSDVLDLLTSQQP
SCPQLYIYSSADRVIPAISVESFVEEQRRIGRNVRACNFISTPHVDHFRNDPELYTLQLT
QFLEDSVLSSCKQSS

Transcript Sequence

Gene sequence data has not been registered.